[l_eclipse_l]

There is no weather stripping around the hatch except around the glass. The spots your talking about are designed for drainage of water inbetween the hatch and the body panels, they are meant to attract and drain water and consequently dirt accumulates there. Just wipe them out with a towel every once in awhile if it bothers you. There should be no water getting to the door jams though, as the flexible plastic piece below the windows should be keeping it out when the door is fully shut.