weird idols on my 01 supercharger prelude

last night I left my lights on over night and it drained my battery so I jumped it started and let it run for about 10 minutes. Then when I was driving it I noticed when I would go to natural it would go to like 500 rpms and 2 times it died on me. So I pulled over and let it sit at idol for like 10 minutes and then drove it again and it seemed fine. I was just wondering if this has happened to anyone before? It seems to be working good now so im thinking it just needed more time to charge up the battery but I was also worried that when it drained the battery something may have changed the timing with either the AVC-R or boost control. If anyone has a Jackson supercharger and this has happened to them let me know.

Vacuum leak is probably present somewhere. Check all your vacuum lines.